Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Snoo
Flybase description The gene Sno oncogene is referred to in FlyBase by the symbol Dmel\Snoo (CG34421, FBgn0085450).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -50.8414 -33.1628 -44.168841 -45.864 -60.067681 -61.239 -50.29193 -39.254124
    Affimetrix absolute value 2.743 2.599 2.815 2.874 2.864 2.626 2.906 2.976
    Affymetric present call in "x" number of chips 0 0 1 0 2 0 1 2
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: nucleotide binding.
There is experimental evidence that it is involved in the biological process: negative regulation of decapentaplegic receptor signaling pathway; neuron development; negative regulation of transforming growth factor beta receptor signaling pathway.
50 alleles are reported.
The phenotypes of these alleles are annotated with 17 unique terms, many of which group under: organ system subdivision; adult segment; organ system; thoracic segment; external compound sense organ; adult; imaginal precursor; embryonic/larval imaginal precursor; larval head segment; integumentary plate; peripheral nervous system.
It has 4 annotated transcripts and 4 annotated polypeptides.
Protein features are: DNA binding domain, putative; SAND domain-like; Transcription regulator SKI/SnoN; Transforming protein Ski; c-SKI Smad4-binding domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression.
Peak expression observed during early pupal stages.
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