Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Brd
Flybase description The gene Bearded is referred to in FlyBase by the symbol Dmel\Brd (CG3096, FBgn0000216).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -50.098 -26.0098 -37.673671 -39.0249 -44.8629 -47.1117 -47.52664 -42.567275
    Affimetrix absolute value 2.771 2.931 2.951 3.106 3.294 3.006 2.983 2.91
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: Notch signaling pathway; sensory organ development; cell fate specification.
36 alleles are reported.
The phenotypes of these alleles are annotated with 16 unique terms, many of which group under: organ system subdivision; sensillum; external compound sense organ; adult segment; adult mesothoracic segment; peripheral nervous system; integumentary plate; compound cell cluster organ; nervous system; sensillum trichodeum.
It has one annotated transcript and one annotated polypeptide.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected.
Peak expression observed within 00-12 hour embryonic stages.