Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name ix
Flybase description The gene intersex is referred to in FlyBase by the symbol Dmel\ix (CG13201, FBgn0001276).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -9.4834 -7.7051 -13.749182 -10.0602 -17.566826 -11.127 -12.40126 -19.380463
    Affimetrix absolute value 5.163 4.673 4.401 5.078 4.646 5.091 4.964 3.983
    Affymetric present call in "x" number of chips 1 2 0 1 1 3 3 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: transcription factor binding; RNA polymerase II transcription cofactor activity.
There is experimental evidence that it is involved in the biological process: regulation of transcription from RNA polymerase II promoter; sex determination.
19 alleles are reported.
The phenotypes of these alleles are annotated with: female genitalia; sternite; male genitalia; gonopod long bristle; sex comb; female genital disc; tergite; female terminalia; anal plate; spermatozoon.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Mediator complex, subunit Med29, metazoa.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-06 hour embryonic stages.