Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name ninaE
Flybase description The gene neither inactivation nor afterpotential E is referred to in FlyBase by the symbol Dmel\ninaE (CG4550, FBgn0002940).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -12.636 -8.6453 -24.051526 -5.2479 -19.820152 -35.0857 -16.82598 -12.427411
    Affimetrix absolute value 4.834 4.532 3.592 6.03 4.452 3.448 4.641 4.613
    Affymetric present call in "x" number of chips 3 3 1 3 3 1 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence that it is involved in the biological process: response to light intensity; phototransduction; negative regulation of compound eye retinal cell programmed cell death; adult locomotory behavior; thermotaxis; photoreceptor cell morphogenesis; rhabdomere development.
109 alleles are reported.
The phenotypes of these alleles are annotated with 22 unique terms, many of which group under: external compound sense organ; organ system subdivision; peripheral nervous system; nervous system; cytoplasmic part; organelle; cell projection membrane; rhabdomere; intracellular membrane-bounded organelle; plasma membrane part.
It has one annotated transcript and one annotated polypeptide.
Protein features are: GPCR, rhodopsin-like superfamily; GPCR, rhodopsin-like, 7TM; Opsin; Opsin RH1/RH2.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of extremely low expression.
Peak expression observed in adult male stages.