Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name pim
Flybase description The gene pimples is referred to in FlyBase by the symbol Dmel\pim (CG5052, FBgn0003087).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -31.505 -29.7771 -36.899527 -37.6434 -49.372222 -28.811 -57.51143 -40.068589
    Affimetrix absolute value 3.44 2.732 2.981 3.155 3.138 3.734 2.709 2.952
    Affymetric present call in "x" number of chips 3 0 0 1 0 3 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence for 12 unique biological process terms, many of which group under: anatomical structure development; cellular component organization or biogenesis; cell cycle; cell cycle process; multicellular organismal process; nuclear division; cell division; epithelial cell differentiation; organ development; embryonic hindgut morphogenesis; mesoderm development.
26 alleles are reported.
The phenotypes of these alleles are annotated with 13 unique terms, many of which group under: organ system; organ system subdivision; portion of tissue; external compound sense organ; somatic cell; nuclear part; embryonic head; cytoplasmic part; cell cycle; adult segment.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Securin sister-chromatid separation inhibitor.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 00-06 hour embryonic stages.