Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name sha
Flybase description The gene shavenoid is referred to in FlyBase by the symbol Dmel\sha (CG13209, FBgn0003382).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -44.691 -24.1166 -37.277574 -48.3409 -56.171629 -53.9629 -49.24947 -40.020467
    Affimetrix absolute value 2.929 3.054 2.957 2.827 2.951 2.809 2.929 2.951
    Affymetric present call in "x" number of chips 0 0 0 0 0 1 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: non-sensory hair organization; cuticle pattern formation; antennal morphogenesis; epidermal cell differentiation; imaginal disc-derived wing hair organization.
15 alleles are reported.
The phenotypes of these alleles are annotated with: trichome; dorsal hair; denticle; dorsal denticle; arista; wing hair; embryonic/larval cuticle; denticle belt.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Quinonprotein alcohol dehydrogenase-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression.
Peak expression observed within 12-18 embryonic stages.