Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name slp1
Flybase description The gene sloppy paired 1 is referred to in FlyBase by the symbol Dmel\slp1 (CG16738, FBgn0003430).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -51.893 -22.69 -45.071737 -45.8124 -60.723823 -58.4099 -58.65326 -44.367857
    Affimetrix absolute value 2.731 3.165 2.733 2.888 2.876 2.697 2.694 2.804
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
It is reported to have molecular function: sequence-specific DNA binding transcription factor activity.
There is experimental evidence that it is involved in the biological process: heart formation; specification of segmental identity, head.
22 alleles are reported.
The phenotypes of these alleles are annotated with 21 unique terms, many of which group under: organ system; primordium; ventral nerve cord primordium; organ system subdivision; cephalopharyngeal skeleton; cuticle; somatic stem cell; eo support cell; mouthpart; embryonic segment; neuroblast NB5-6.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Transcription factor, fork head; Transcription factor, fork head, conserved site; Winged helix-turn-helix transcription repressor DNA-binding.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 00-12 hour embryonic stages.