Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name thr
Flybase description The gene three rows is referred to in FlyBase by the symbol Dmel\thr (CG5785, FBgn0003701).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -47.6116 -25.0465 -32.515336 -37.4012 -58.051525 -44.8897 -48.26923 -38.904405
    Affimetrix absolute value 2.84 2.988 3.168 3.17 2.937 3.075 2.972 3.013
    Affymetric present call in "x" number of chips 0 0 0 0 0 1 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence for 14 unique biological process terms, many of which group under: anatomical structure development; multicellular organismal process; cellular component organization or biogenesis; cell cycle; digestive tract development; cell cycle process; organ development; cell division; biological regulation; organelle organization.
46 alleles are reported.
The phenotypes of these alleles are annotated with 12 unique terms, many of which group under: organ system; organ system subdivision; external compound sense organ; non-connected developing system; embryonic head; presumptive embryonic/larval nervous system; midgut constriction; cell part; cleavage stage embryo; portion of tissue.
It has one annotated transcript and one annotated polypeptide.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 00-06 hour embryonic stages.