|Home||Overview of gut regions||Anatomy||Histology||Transgene expression mapping||Gene expression|
|Search expression data by gene:|
|Flybase description||The gene rhomboid is referred to in FlyBase by the symbol Dmel\rho (CG1004, FBgn0004635).|
|Expression data along the gut||
|Intestinal gene expression in different physiological conditions||
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
|Gene details (from Flybase)|| It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: serine-type endopeptidase activity.
There is experimental evidence for 15 unique biological process terms, many of which group under: anatomical structure development; post-embryonic appendage morphogenesis; biological regulation; organ development; post-embryonic organ morphogenesis; response to chemical stimulus; learning or memory; cellular component organization or biogenesis; cell division; associative learning.
68 alleles are reported.
The phenotypes of these alleles are annotated with 160 unique terms, many of which group under: hypodermal muscle of larval abdomen; organ system subdivision; organ system; A1-7 oblique muscle; adult segment; larval abdominal segment 5; embryonic/larval neuron; primordium; A1-7 ventral oblique muscle 1; nervous system.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Peptidase S54, rhomboid; Peptidase S54, rhomboid domain; Peptidase S54, rhomboid, metazoan.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 00-18 hour embryonic stages.