Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name RpS13
Flybase description The gene Ribosomal protein S13 is referred to in FlyBase by the symbol Dmel\RpS13 (CG13389, FBgn0010265).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 26.7101 40.9743 24.645602 21.9314 14.306573 21.3146 22.26547 22.344004
    Affimetrix absolute value 13.144 12.96 12.771 12.834 12.581 12.975 13.019 12.651
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome.
There is experimental evidence that it is involved in the biological process: mitotic spindle elongation; mitotic spindle organization.
9 alleles are reported.
The phenotypes of these alleles are annotated with: macrochaeta; scutellar bristle.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Ribosomal protein S13/S15, N-terminal; Ribosomal protein S15; Ribosomal protein S15P; S15/NS1, RNA-binding.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression.
Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult female stages.
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