Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name LamC
Flybase description The gene Lamin C is referred to in FlyBase by the symbol Dmel\LamC (CG10119, FBgn0010397).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 1.8961 1.7584 0.491602 -0.222 -0.413237 -0.2004 1.48893 0.509646
    Affimetrix absolute value 9.331 8.411 8.371 8.492 8.657 8.687 9.111 8.46
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: structural molecule activity.
There is experimental evidence that it is involved in the biological process: nuclear pore distribution.
41 alleles are reported.
The phenotypes of these alleles are annotated with: metathoracic tarsal segment; metathoracic femur; embryonic/larval salivary gland; metathoracic metatarsus; mesothoracic tergum; imaginal disc; metathoracic tibia; ventral thoracic disc; nucleus; embryonic/larval somatic muscle.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Filament; Intermediate filament protein; Intermediate filament, C-terminal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression.
Peak expression observed within 12-24 hour embryonic stages, during early larval stages.