Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name Fkbp13
Flybase description The gene Fkbp13 is referred to in FlyBase by the symbol Dmel\Fkbp13 (CG9847, FBgn0010470).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 8.2982 10.0403 4.895353 2.4188 2.966962 2.3417 2.33265 3.833964
    Affimetrix absolute value 11.449 10.919 10.396 9.655 10.249 9.777 9.764 10.073
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: FK506 binding; peptidyl-prolyl cis-trans isomerase activity.
There is experimental evidence that it is involved in the biological process: inter-male aggressive behavior.
21 alleles are reported.
The phenotype of these alleles is annotated with: synapse.
It has 3 annotated transcripts and 3 annotated polypeptides.
Protein features are: Calcium-binding EF-hand; EF-HAND 2; EF-Hand 1, calcium-binding site; EF-hand-like domain; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 06-18 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period.