Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Nmda1
Flybase description The gene N-methyl-D-aspartate receptor-associated protein is referred to in FlyBase by the symbol Dmel\Nmda1 (CG3798, FBgn0013305).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 2.8788 7.2844 1.755315 1.7089 -0.444573 1.4015 3.1145 1.859635
    Affimetrix absolute value 9.93 10.476 8.972 9.146 8.617 9.028 10.155 9.101
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: N-methyl-D-aspartate selective glutamate receptor activity.
The biological processes in which it is involved are not known.
8 alleles are reported.
The phenotype of these alleles is annotated with: heart primordium.
It has 8 annotated transcripts and 8 annotated polypeptides.
Protein features are: Inhibitor of apoptosis-promoting Bax1-related.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression.
Peak expression observed during late larval stages, during early pupal stages, in adult male stages.