Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name cnn
Flybase description The gene centrosomin is referred to in FlyBase by the symbol Dmel\cnn (CG4832, FBgn0013765).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -5.3197 -5.0577 -11.723582 -11.257 -16.357102 -7.6947 -8.70218 -12.854771
    Affimetrix absolute value 6.04 5.287 4.732 4.963 4.791 5.683 5.485 4.625
    Affymetric present call in "x" number of chips 3 3 2 3 1 3 3 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence for 14 unique biological process terms, many of which group under: cellular component organization or biogenesis; anatomical structure development; cell cycle; cell division; multicellular organismal process; cell cycle process; organelle organization; biological regulation; cellular process involved in reproduction; M phase of meiotic cell cycle; central nervous system development; digestive tract development.
37 alleles are reported.
The phenotypes of these alleles are annotated with 15 unique terms, many of which group under: organelle; cytoplasmic part; organ system; somatic stem cell; centrosome; multicellular structure; protein complex; somatic cell; blastoderm embryo; spermatocyte; cell cycle; adult segment.
It has 12 annotated transcripts and 12 annotated polypeptides.
Protein features are: Spindle associated.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression.
Peak expression observed within 00-12 hour embryonic stages.