Flygut: an atlas of the Drosophila adult midgut

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Gene name Ddx1
Flybase description The gene Dead-box-1 is referred to in FlyBase by the symbol Dmel\Ddx1 (CG9054, FBgn0015075).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -5.2138 -3.7658 -4.638692 -5.6368 -5.909156 -5.6046 -7.76002 -5.643252
    Affimetrix absolute value 6.036 5.707 5.979 5.896 6.204 6.112 5.63 5.761
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: ATP-dependent helicase activity; helicase activity.
There is experimental evidence that it is involved in the biological process: embryonic development via the syncytial blastoderm.
5 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: B30.
2/SPRY domain; Concanavalin A-like lectin/glucanase; DEAD-like helicase; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; RNA helicase, DEAD-box type, Q motif; SPla/RYanodine receptor SPRY; SPla/RYanodine receptor subgroup.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 00-12 hour embryonic stages, during early pupal stages, in stages of adults of both sexes.
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