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|Flybase description||The gene pacman is referred to in FlyBase by the symbol Dmel\pcm (CG3291, FBgn0020261).|
|Expression data along the gut||
|Intestinal gene expression in different physiological conditions||
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
|Gene details (from Flybase)|| It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: 5'-3' exoribonuclease activity.
There is experimental evidence that it is involved in the biological process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; dorsal closure; RNA interference; regulation of cytoplasmic mRNA processing body assembly; wound healing; imaginal disc fusion, thorax closure; nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'; imaginal disc-derived wing morphogenesis; spermatogenesis.
12 alleles are reported.
The phenotypes of these alleles are annotated with: embryonic/first instar larval cuticle; testis; mesothoracic tergum; wing; spermatozoon.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: 5'-3' exoribonuclease 1; Putative 5-3 exonuclease.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-06 hour embryonic stages.