Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Scp2
Flybase description The gene Sarcoplasmic calcium-binding protein 2 is referred to in FlyBase by the symbol Dmel\Scp2 (CG14904, FBgn0020907).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -16.3846 -26.3065 -33.725682 -7.3499 -59.476071 -45.5285 -39.84014 -15.200247
    Affimetrix absolute value 4.568 2.957 3.211 5.537 2.904 3.053 3.43 4.666
    Affymetric present call in "x" number of chips 3 0 2 3 0 1 1 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: GTPase activity.
The biological processes in which it is involved are not known.
One allele is reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Calcium-binding EF-hand; EF-HAND 2; EF-Hand 1, calcium-binding site; EF-hand-like domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression.
Peak expression observed during early larval stages, during late pupal stages.