Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name beta'Cop
Flybase description The gene β'-coatomer protein is referred to in FlyBase by the symbol Dmel\β'Cop (CG6699, FBgn0025724).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.9527 3.1412 1.884399 1.1459 -0.347124 -1.1308 -0.50626 1.34489
    Affimetrix absolute value 7.46 9.256 9.081 8.578 8.738 8.391 8.337 8.648
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: structural molecule activity.
There is experimental evidence that it is involved in the biological process: regulation of lipid storage.
4 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Coatomer, WD associated region; Coatomer, beta' subunit; G-protein beta WD-40 repeat; Quinoprotein amine dehydrogenase, beta chain-like; WD40 repeat; WD40 repeat 2; WD40 repeat, subgroup; WD40 repeat-like-containing domain; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 06-12 hour embryonic stages.