Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name ind
Flybase description The gene intermediate neuroblasts defective is referred to in FlyBase by the symbol Dmel\ind (CG11551, FBgn0025776).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -25.2173 -15.0756 -20.796688 -23.719 -32.796161 -31.2342 -27.10426 -21.581164
    Affimetrix absolute value 3.757 3.743 3.799 3.821 3.731 3.598 3.79 3.85
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: sequence-specific DNA binding transcription factor activity; transcription factor binding; sequence-specific DNA binding.
There is experimental evidence that it is involved in the biological process: regulation of transcription from RNA polymerase II promoter; negative regulation of transcription from RNA polymerase II promoter.
20 alleles are reported.
The phenotypes of these alleles are annotated with: RP2 neuron; neuroblast of ventral nerve cord primordium; intermediate ventral neurectoderm.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Homeobox; Homeobox, conserved site; Homeobox, eukaryotic; Homeodomain-like; Homeodomain-related.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of no expression detected.
Peak expression observed within 00-06 hour embryonic stages.