Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name eIF5B
Flybase description The gene eIF5B is referred to in FlyBase by the symbol Dmel\eIF5B (CG10840, FBgn0026259).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.6367 1.468 1.219787 -0.4705 -1.78612 -1.5437 -1.51784 -1.473436
    Affimetrix absolute value 7.701 8.166 8.436 8.222 7.941 7.946 7.984 7.763
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: translation initiation factor activity.
Based on sequence similarity, it is predicted to be involved in the biological process: translational initiation.
11 alleles are reported.
No phenotypic data is available.
It has 5 annotated transcripts and 5 annotated polypeptides.
Protein features are: Protein synthesis factor, GTP-binding; Small GTP-binding protein domain; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation/initiation factor/Ribosomal, beta-barrel; Translation initiation factor IF- 2; Translation initiation factor IF- 2, domain 3.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression.
Peak expression observed within 00-06 hour embryonic stages, during early larval stages, in stages of adults of both sexes.