Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name kirre
Flybase description The gene kin of irre is referred to in FlyBase by the symbol Dmel\kirre (CG3653, FBgn0028369).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -37.5149 -20.846 -27.377356 -35.7187 -38.975383 -36.6293 -38.12379 -25.139824
    Affimetrix absolute value 3.181 3.277 3.452 3.233 3.494 3.381 3.302 3.625
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding.
There is experimental evidence that it is involved in the biological process: myoblast fusion; homophilic cell adhesion; larval visceral muscle development; heterophilic cell-cell adhesion; regulation of striated muscle tissue development; garland cell differentiation; compound eye morphogenesis.
71 alleles are reported.
The phenotypes of these alleles are annotated with: eye; myoblast; inter-ommatidial precursor cell; interommatidial bristle; embryonic/larval garland cell; inter-ommatidial cell; ommatidium.
It has 6 annotated transcripts and 6 annotated polypeptides.
Protein features are: CD80-like, immunoglobulin C2-set; Immunoglobulin I-set; Immunoglobulin V-set; Immunoglobulin subtype; Immunoglobulin-like; Immunoglobulin-like fold.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression.
Peak expression observed within 06-24 hour embryonic stages, at stages throughout the pupal period.