Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Ef1beta
Flybase description The gene Elongation factor 1 β is referred to in FlyBase by the symbol Dmel\Ef1β (CG6341, FBgn0028737).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 17.6989 22.4336 13.002935 15.8668 7.971126 12.4659 13.19775 12.087699
    Affimetrix absolute value 12.553 12.099 11.859 12.363 11.742 12.198 12.26 11.779
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: translation elongation factor activity; translation release factor activity.
Based on sequence similarity, it is predicted to be involved in the biological process: translational elongation.
5 alleles are reported.
The phenotypes of these alleles are annotated with: dorsocentral bristle; scutellar bristle.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Elongation factor 1 beta central acidic region, eukaryote; Glutathione S-transferase, C-terminal-like; Translation elongation factor EF1B, beta/delta chains, conserved site; Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange; Translation elongation factor EF1B/ribosomal protein S6.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression.
Peak expression observed within 00-06 hour embryonic stages.