Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CSN6
Flybase description The gene COP9 complex homolog subunit 6 is referred to in FlyBase by the symbol Dmel\CSN6 (CG6932, FBgn0028837).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -3.5301 -2.3621 -3.073041 -3.2006 -3.9412 -3.7445 -5.03212 -3.729839
    Affimetrix absolute value 6.592 6.379 6.596 6.713 6.788 6.663 6.242 6.364
    Affymetric present call in "x" number of chips 1 3 2 2 2 2 1 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: lateral inhibition; protein stabilization; mitotic cell cycle G2/M transition DNA damage checkpoint.
4 alleles are reported.
The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Mov34/MPN/PAD-1.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression.
Peak expression observed within 00-12 hour embryonic stages, in adult female stages.