Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name nerfin-1
Flybase description The gene nervous fingers 1 is referred to in FlyBase by the symbol Dmel\nerfin-1 (CG13906, FBgn0028999).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -48.1211 -29.4858 -42.12605 -47.9823 -56.770595 -55.7013 -66.03596 -46.093415
    Affimetrix absolute value 2.824 2.757 2.792 2.808 2.955 2.774 2.514 2.736
    Affymetric present call in "x" number of chips 0 0 1 0 0 1 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding; nucleic acid binding.
There is experimental evidence that it is involved in the biological process: axon guidance; dendrite morphogenesis; neuron development; neuron fate commitment.
9 alleles are reported.
The phenotypes of these alleles are annotated with: medial longitudinal fascicle; intermediate longitudinal fascicle; posterior commissure; lateral longitudinal fascicle; longitudinal connective; pCC neuron; anterior commissure.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression.
Peak expression observed within 06-18 hour embryonic stages.