Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG1950
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG1950 (FBgn0030370).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -51.9866 -30.1869 -41.122843 -48.7631 -57.330441 -51.0335 -55.24786 -43.453809
    Affimetrix absolute value 2.713 2.704 2.855 2.783 2.917 2.891 2.765 2.836
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: ubiquitin thiolesterase activity; omega peptidase activity.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: ubiquitin-dependent protein catabolic process.
One allele is reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1; Ubiquitinyl hydrolase, UCH37 type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of no expression detected.
Peak expression observed in adult male stages.