Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Rat1
Flybase description This gene is referred to in FlyBase by the symbol Dmel\Rat1 (CG10354, FBgn0031868).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -17.3598 -11.1736 -13.001014 -17.2766 -20.724596 -16.3526 -21.54763 -18.713928
    Affimetrix absolute value 4.303 4.157 4.477 4.288 4.389 4.531 4.134 4.062
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 2
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: 5'-3' exonuclease activity; 5'-3' exoribonuclease activity.
There is experimental evidence that it is involved in the biological process: neurogenesis.
7 alleles are reported.
The phenotype of these alleles is annotated with: mesothoracic tergum.
It has one annotated transcript and one annotated polypeptide.
Protein features are: 5'-3' exoribonuclease 2; Putative 5-3 exonuclease.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-12 hour embryonic stages.