Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG8232
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG8232 (FBgn0033352).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.8145 1.2404 -1.658786 -1.5329 -2.407142 -1.5593 -1.43641 -2.123936
    Affimetrix absolute value 7.566 7.924 7.479 7.797 7.555 7.931 8.053 7.214
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: poly(A)-specific ribonuclease activity.
There is experimental evidence that it is involved in the biological process: nuclear-transcribed mRNA poly(A) tail shortening.
2 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Exonuclease; Exonuclease, RNase T/DNA polymerase III; Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Ribonuclease H-like; WD40 repeat-like-containing domain; WD40/YVTN repeat-like-containing domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-06 hour embryonic stages.