Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG6543
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG6543 (FBgn0033879).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 3.5934 6.6574 6.23592 3.7191 2.929631 3.0799 2.18142 4.808445
    Affimetrix absolute value 10.225 10.342 10.781 10.281 10.296 10.181 9.659 10.432
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: enoyl-CoA hydratase activity.
Based on sequence similarity, it is predicted to be involved in the biological process: fatty acid beta-oxidation.
4 alleles are reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Crontonase, C-terminal; Crotonase, core; Enoyl-CoA hydratase/isomerase, conserved site.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 00-06 hour embryonic stages, at stages throughout the larval period, in adult female stages.