Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG8079
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG8079 (FBgn0034002).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -14.2675 -11.5197 -18.622077 -14.3022 -18.995675 -3.7792 -11.59898 -15.774904
    Affimetrix absolute value 4.581 4.096 4.004 4.56 4.524 6.646 5.077 4.278
    Affymetric present call in "x" number of chips 0 1 0 0 0 3 2 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: nucleic acid binding.
It is reported to be involved in the biological process: nuclear mRNA splicing, via spliceosome.
3 alleles are reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: D111/G-patch; Forkhead-associated (FHA) domain; SMAD/FHA domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 18-24 hour embryonic stages.