Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name Obp57c
Flybase description The gene Odorant-binding protein 57c is referred to in FlyBase by the symbol Dmel\Obp57c (CG13421, FBgn0034509).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -8.6824 -32.4258 -42.300761 -51.4995 -68.677221 -57.8772 -58.46702 -40.17271
    Affimetrix absolute value 5.326 2.619 2.822 2.703 2.657 2.724 2.683 2.913
    Affymetric present call in "x" number of chips 3 0 0 0 0 1 0 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: odorant binding.
Based on sequence similarity, it is predicted to be involved in the biological process: sensory perception of chemical stimulus.
One allele is reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Insect pheromone/odorant binding protein PhBP; Pheromone/general odorant binding protein, PBP/GOBP; Pheromone/general odorant binding protein, PBP/GOBP, domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of no expression detected.
Peak expression observed during late pupal stages, in stages of adults of both sexes.