Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG10630
Flybase description The gene blanks is referred to in FlyBase by the symbol Dmel\blanks (CG10630, FBgn0035608).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -5.3983 -3.8133 -11.688324 -12.421 -18.81361 -19.0786 -8.25288 -9.260645
    Affimetrix absolute value 5.982 5.689 4.693 4.755 4.524 4.317 5.518 5.031
    Affymetric present call in "x" number of chips 3 3 3 3 1 1 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: siRNA binding.
There is experimental evidence that it is involved in the biological process: RNA interference; regulation of chromatin silencing.
4 alleles are reported.
The phenotypes of these alleles are annotated with: sperm individualization complex; individualization stage spermatid.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Double-stranded RNA-binding; Double-stranded RNA-binding-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression.
Peak expression observed at stages throughout the pupal period, in adult male stages.