Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name CG6839
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG6839 (FBgn0036831).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -26.0077 50.8209 5.55995 -17.1126 -11.210817 -15.0276 -33.98697 9.224877
    Affimetrix absolute value 3.759 13.276 10.45 4.405 5.376 4.973 3.472 11.381
    Affymetric present call in "x" number of chips 0 3 3 2 2 1 0 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: metal ion binding; hydrolase activity; nucleic acid binding.
The biological processes in which it is involved are not known.
4 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected.
Peak expression observed at stages throughout the larval period.