Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG9836
Flybase description This gene is referred to in FlyBase by the symbol Dmel\CG9836 (FBgn0037637).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 3.7922 7.342 5.210712 7.1376 3.174613 3.6237 4.07491 4.600718
    Affimetrix absolute value 10.33 10.492 10.55 11.215 10.424 10.418 10.576 10.434
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: iron-sulfur cluster binding; iron ion binding.
An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: iron-sulfur cluster assembly.
3 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: ISC system FeS cluster assembly, IscU scaffold; NIF system FeS cluster assembly, NifU, N-terminal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression.
Peak expression observed in adult male stages.