Flygut: an atlas of the Drosophila adult midgut

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Gene name CG11033
Flybase description The gene Lysine (K)-specific demethylase 2 is referred to in FlyBase by the symbol Dmel\Kdm2 (CG11033, FBgn0037659).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -6.8898 -3.1658 -6.208888 -5.6658 -13.236673 -6.5248 -3.95506 -8.495121
    Affimetrix absolute value 5.633 5.962 5.57 5.915 5.114 5.86 6.64 5.226
    Affymetric present call in "x" number of chips 3 3 1 3 2 3 3 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: histone demethylase activity (H3-trimethyl-K4 specific).
There is experimental evidence that it is involved in the biological process: histone H3-K4 demethylation, trimethyl-H3-K4-specific.
33 alleles are reported.
The phenotype of these alleles is annotated with: nucleolus.
It has one annotated transcript and one annotated polypeptide.
Protein features are: F-box domain, cyclin-like; Leucine-rich repeat, cysteine-containing subtype; Transcription factor jumonji; Transcription factor jumonji/aspartyl beta-hydroxylase; Zinc finger, CXXC-type.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression.
Peak expression observed within 00-18 hour embryonic stages, during early pupal stages.
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