Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name CG6782
Flybase description The gene scheggia is referred to in FlyBase by the symbol Dmel\sea (CG6782, FBgn0037912).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 4.9441 9.9168 14.239002 4.7533 3.911952 2.5843 5.89162 7.421076
    Affimetrix absolute value 10.713 10.91 11.976 10.622 10.712 9.913 11.108 11.083
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: transmembrane transporter activity; tricarboxylate secondary active transmembrane transporter activity.
There is experimental evidence that it is involved in the biological process: citrate transport; mitochondrial citrate transport.
16 alleles are reported.
The phenotypes of these alleles are annotated with: condensed chromosome; embryonic/larval neuroblast.
It has 4 annotated transcripts and 4 annotated polypeptides.
Protein features are: Mitochondrial carrier domain; Mitochondrial substrate/solute carrier.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression.
Peak expression observed within 00-06 and 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene.
The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined.