Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name RpS5b
Flybase description The gene Ribosomal protein S5b is referred to in FlyBase by the symbol Dmel\RpS5b (CG7014, FBgn0038277).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -6.3132 -6.9893 -10.202462 -5.4256 -12.477346 -11.8714 -13.32029 -10.955966
    Affimetrix absolute value 5.763 4.957 4.831 5.966 5.121 4.995 4.834 4.808
    Affymetric present call in "x" number of chips 2 2 0 3 2 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome.
There is experimental evidence that it is involved in the biological process: neurogenesis.
5 alleles are reported.
The phenotype of these alleles is annotated with: mesothoracic tergum.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Ribosomal protein S7; Ribosomal protein S7 domain; Ribosomal protein S7, conserved site; Ribosomal protein S7, eukaryotic/archaeal.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression.
Peak expression observed within 00-18 hour embryonic stages, in adult female stages.