Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name cid
Flybase description The gene centromere identifier is referred to in FlyBase by the symbol Dmel\cid (CG13329, FBgn0040477).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -45.7689 -26.278 -36.714875 -47.6761 -48.799997 -56.8115 -64.25198 -41.022485
    Affimetrix absolute value 2.917 2.924 3.005 2.815 3.165 2.737 2.552 2.911
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: microtubule motor activity.
There is experimental evidence that it is involved in the biological process: mitotic metaphase plate congression; mitotic spindle elongation; kinetochore assembly; chromosome segregation; mitosis; mitotic spindle organization; kinetochore organization; spindle assembly; neurogenesis.
25 alleles are reported.
The phenotypes of these alleles are annotated with 13 unique terms, many of which group under: cell cycle; cell cycle process; organ system subdivision; external compound sense organ; organelle; M phase; nucleus; cellular process; organ system; nuclear part; eo support cell; cellular component organization or biogenesis.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Histone H3; Histone core; Histone-fold.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 00-06 hour embryonic stages.