Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name slam
Flybase description The gene slow as molasses is referred to in FlyBase by the symbol Dmel\slam (CG9506, FBgn0043854).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -41.4658 -25.5595 -33.369584 -39.1038 -47.169469 -43.7791 -47.19165 -34.006396
    Affimetrix absolute value 3.04 2.97 3.189 3.109 3.221 3.121 3.001 3.196
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: germ cell migration; cellularization.
9 alleles are reported.
The phenotypes of these alleles are annotated with: embryonic/larval midgut primordium; gonadal sheath proper primordium; germline cell; cycle 14 embryo.
It has one annotated transcript and one annotated polypeptide.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression.
Peak expression observed within 00-06 hour embryonic stages.