Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name cuff
Flybase description The gene cutoff is referred to in FlyBase by the symbol Dmel\cuff (CG13190, FBgn0260932).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -27.0045 -13.7254 -15.429149 -20.1086 -16.237685 -9.1529 -31.94483 -16.986787
    Affimetrix absolute value 3.656 3.848 4.261 4.076 4.822 5.48 3.576 4.156
    Affymetric present call in "x" number of chips 0 1 2 1 2 3 0 2
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: dorsal/ventral pattern formation; ovarian fusome organization; oogenesis; germarium-derived female germ-line cyst formation; karyosome formation.
16 alleles are reported.
The phenotypes of these alleles are annotated with: female fusome; chorion; female germline cyst; oocyte nucleus; germarium.
It has one annotated transcript and one annotated polypeptide.
Protein features are: RAI1-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression.
Peak expression observed within 00-12 hour embryonic stages.