Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name scny
Flybase description The gene scrawny is referred to in FlyBase by the symbol Dmel\scny (CG5505, FBgn0260936).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -3.0505 -0.3632 -1.422646 -1.8503 -2.243525 -1.9822 -2.9085 -1.936324
    Affimetrix absolute value 6.818 7.578 7.688 7.522 7.616 7.598 7.024 7.354
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions There is not condition-dependent expression data available for this gene.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
An electronic pipeline based on InterPro domains suggests that it has the molecular function: ubiquitin thiolesterase activity.
There is experimental evidence that it is involved in the biological process: regulation of apoptosis; growth; histone deubiquitination; molting cycle, chitin-based cuticle.
23 alleles are reported.
The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: organ system; anatomical structure; multicellular structure; external compound sense organ; adult; organ system subdivision; portion of tissue; eo support cell; sense organ; multi-tissue structure; germline cell; female germline cell; male organism; peripheral nervous system.
It has 8 annotated transcripts and 8 annotated polypeptides.
Protein features are: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages.