Flygut: an atlas of the Drosophila adult midgut

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Gene name Aats-ala
Flybase description The gene Alanyl-tRNA synthetase is referred to in FlyBase by the symbol Dmel\Aats-ala (CG13391, FBgn0027094).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -2.4005 -0.3509 -1.334158 -2.6738 -2.580915 -2.7191 -2.57219 -2.146778
    Affimetrix absolute value 7.146 7.594 7.773 6.99 7.411 7.142 7.217 7.163
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Based on sequence similarity, it is predicted to have molecular function: alanine-tRNA ligase activity.
Based on sequence similarity, it is predicted to be involved in the biological process: alanyl-tRNA aminoacylation.
3 alleles are reported.
No phenotypic data is available.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Alanyl-tRNA synthetase, class IIc; Alanyl-tRNA synthetase, class IIc, N-terminal; Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain; Alanyl-tRNA synthetase, class IIc, core domain; Alanyl-tRNA synthetase, eukaryota/bacteria; Phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression.
Peak expression observed within 00-18 hour embryonic stages, during early larval stages, during late pupal stages, in adult female stages.