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Gene expression patterns along the Drosophila midgut
We analyzed the gut expression pattern of 210 reporter transgene lines. This table indicates for each line the transgene type, its expression pattern (+ indicates expression in the corresponding tissue), and the labeling system that has been used (crossed with UAS-nlsGFP for Gal4 transgenes, or direct visualization for GFP-trap lines).Transgenes with midgut expression were divided in two categories: a- transgenes that are expressed in stem cells and that exhibit variability in their expression pattern (labeled as "Variable"), and b- transgenes that are expressed in enterocytes ("Stereotypic"). Transgenes that are expressed in enterocytes have been quantified. A graph showing the GFP intensity along the gut, its projection on our 3D gut model, as well as a representative image, can been accessed by clicking on the name of the line.
The expression profile of different transgenes can be simultaneously visualized and thus compared by clicking on the open boxes on the left of the table) and then on the link "compare GFP expression".
Lines can be sorted by name (sorting triangle at the top of columns) or searched by keyword (top right).
| Stock | Midgut patterning | Foregut | Hindgut | M. Tubules | Muscles | Stocks origins | Transgene type | |||
|---|---|---|---|---|---|---|---|---|---|---|
| Stereotypic | Variable | Crop | Proventriculus | |||||||
| 103491 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103492 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103493 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 103495 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103497 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103498 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 103514 | + | - | - | - | + | - | - | DGRC | Gal4 | |
| 103516 | + | - | - | + | - | - | - | DGRC | Gal4 | |
| 103517 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103518 | + | - | - | + | - | - | + | DGRC | Gal4 | |
| 103519 | + | - | + | + | + | + | - | DGRC | Gal4 | |
| 103522 | - | - | - | + | - | + | + | DGRC | Gal4 | |
| 103527 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103533 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 103536 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 103538 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 103542 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103550 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103551 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 103553 | + | - | - | + | + | + | - | DGRC | Gal4 | |
| 103554 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 103555 | + | - | - | + | - | - | - | DGRC | Gal4 | |
| 103574 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103575 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103580 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103585 | - | + | - | - | + | - | - | DGRC | Gal4 | |
| 103589 | - | + | - | - | - | + | - | DGRC | Gal4 | |
| 103590 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103591 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 103595 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103596 | - | - | - | + | - | - | - | DGRC | Gal4 | |
| 103602 | + | - | - | - | + | + | - | DGRC | Gal4 | |
| 103605 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103606 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103608 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103610 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 103631 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 103634 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103635 | - | - | - | + | + | - | - | DGRC | Gal4 | |
| 103636 | - | + | - | + | + | + | - | DGRC | Gal4 | |
| 103637 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 103687 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103746 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 103853 | + | - | + | + | + | - | - | DGRC | Gal4 | |
| 103854 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 103860 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103863 | - | - | - | - | - | - | + | DGRC | Gal4 | |
| 103865 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103878 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 103882 | + | - | + | + | + | - | - | DGRC | Gal4 | |
| 103900 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103902 | + | - | - | + | - | - | - | DGRC | Gal4 | |
| 103904 | + | - | + | + | + | + | + | DGRC | Gal4 | |
| 103910 | + | - | - | + | + | + | - | DGRC | Gal4 | |
| 103922 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 103923 | + | - | - | - | + | + | - | DGRC | Gal4 | |
| 103928 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 103930 | - | + | - | - | + | - | - | DGRC | Gal4 | |
| 103943 | - | - | - | - | - | + | - | DGRC | Gal4 | |
| 103972 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 103986 | + | - | + | + | - | + | - | DGRC | Gal4 | |
| 103988 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 103989 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 103992 | + | - | + | + | - | - | - | DGRC | Gal4 | |
| 104001 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104012 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104028 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104053 | - | + | + | - | + | + | + | DGRC | Gal4 | |
| 104064 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 104070 | - | + | - | + | + | - | - | DGRC | Gal4 | |
| 104130 | - | - | - | + | - | - | - | DGRC | Gal4 | |
| 104173 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104178 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 104181 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104184 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 104191 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 104193 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 104268 | - | - | - | - | + | + | - | DGRC | Gal4 | |
| 104274 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104312 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104359 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 104363 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 104429 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 104481 | - | + | - | - | + | - | - | DGRC | Gal4 | |
| 104503 | - | - | - | + | + | + | - | DGRC | Gal4 | |
| 104530 | + | - | - | - | + | + | + | DGRC | Gal4 | |
| 104563 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104679 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104810 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 104836 | + | - | - | - | + | - | - | DGRC | Gal4 | |
| 104876 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 104973 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 105069 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 105152 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 105156 | + | - | + | + | + | + | - | DGRC | Gal4 | |
| 105201 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 105202 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 105221 | + | - | + | + | - | + | + | DGRC | Gal4 | |
| 105259 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 105328 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 105339 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 105362 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 106143 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 1099 | + | - | - | - | - | - | - | Thomas Preat | Gal4 | |
| 110560 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110565 | + | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110568 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110570 | + | - | - | + | - | + | - | DGRC | GFP Trap | |
| 110572 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110602 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110605 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110611 | + | - | - | + | - | - | - | DGRC | GFP Trap | |
| 110614 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110636 | + | - | - | - | + | - | - | DGRC | GFP Trap | |
| 110643 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110647 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110726 | + | - | - | + | - | - | - | DGRC | GFP Trap | |
| 110751 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110775 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110777 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110780 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110781 | + | - | + | + | + | + | - | DGRC | GFP Trap | |
| 110787 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 110796 | - | - | - | - | - | - | - | DGRC | GFP Trap | |
| 112009 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 112041 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 112132 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 112446 | + | - | - | + | - | - | - | DGRC | Gal4 | |
| 112451 | - | + | + | + | + | + | - | DGRC | Gal4 | |
| 112462 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 112465 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 112480 | - | + | - | - | - | - | - | DGRC | Gal4 | |
| 112482 | + | - | + | - | + | + | - | DGRC | Gal4 | |
| 112486 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 112511 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 112518 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 112607 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 112663 | + | - | + | + | + | + | - | DGRC | Gal4 | |
| 112741 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 112869 | - | + | - | + | + | - | - | DGRC | Gal4 | |
| 112906 | + | - | - | + | + | + | - | DGRC | Gal4 | |
| 112920 | + | - | - | + | + | - | - | DGRC | Gal4 | |
| 112950 | + | - | + | + | - | + | - | DGRC | Gal4 | |
| 112994 | + | - | + | + | - | + | - | DGRC | Gal4 | |
| 113052 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 113094 | + | - | - | - | - | + | - | DGRC | Gal4 | |
| 113118 | + | - | + | + | + | - | - | DGRC | Gal4 | |
| 113180 | + | - | + | + | - | + | - | DGRC | Gal4 | |
| 113244 | - | + | - | + | - | - | - | DGRC | Gal4 | |
| 113269 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 113273 | + | - | - | + | - | - | - | DGRC | Gal4 | |
| 113276 | + | - | - | + | + | - | - | DGRC | Gal4 | |
| 113280 | + | - | - | + | + | + | - | DGRC | Gal4 | |
| 113303 | - | - | - | + | + | - | - | DGRC | Gal4 | |
| 113370 | + | - | - | - | + | + | - | DGRC | Gal4 | |
| 113427 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 113455 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 113498 | + | - | - | - | - | - | - | DGRC | Gal4 | |
| 113545 | + | - | - | + | + | + | - | DGRC | Gal4 | |
| 113832 | + | - | - | - | + | + | - | DGRC | Gal4 | |
| 113838 | + | - | - | + | - | + | + | DGRC | Gal4 | |
| 113846 | - | + | - | + | + | + | - | DGRC | Gal4 | |
| 113916 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 113950 | + | - | - | + | - | + | - | DGRC | Gal4 | |
| 114002 | + | - | - | + | + | - | - | DGRC | Gal4 | |
| 11527 | - | - | - | - | - | - | - | Bloomington | Gal4 | |
| 123608 | - | - | - | - | - | - | - | DGRC | Gal4 | |
| 143fkh | - | + | + | + | - | + | + | Lemaitre | Gal4 | |
| 30638 | - | - | - | - | - | - | - | Bloomington | Gal4 | |
| 33105 | - | - | - | - | - | - | - | Bloomington | Gal4 | |
| 3824 | + | - | - | - | - | + | - | Thomas Preat | Gal4 | |
| 5'Cs | + | - | - | - | - | + | - | Richards Burke | Gal4 | |
| 5'HR | + | - | + | + | - | + | - | Richards Burke | Gal4 | |
| A144 | + | - | - | + | - | - | - | Xavier Morin | GFP Trap | |
| A152 | + | - | - | + | - | - | - | Xavier Morin | GFP Trap | |
| A153 | + | - | - | - | + | - | - | Xavier Morin | GFP Trap | |
| A165 | - | - | - | - | - | - | - | Lemaitre | GFP Trap | |
| BA00164 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| BA00187 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| BA00204 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| BA00207 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| BA00213 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| BL23782 | - | - | - | - | + | - | - | Bloomington | Gal4 | |
| BL29142 | - | - | - | - | + | - | - | Bloomington | Gal4 | |
| BL29271 | - | - | - | - | + | - | - | Bloomington | Gal4 | |
| CA06503 | + | - | - | - | - | - | - | Flytrap | GFP Trap | |
| CA06506 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| CA06507 | + | - | - | + | - | - | - | Flytrap | GFP Trap | |
| CA06526 | - | + | - | + | - | - | - | Flytrap | GFP Trap | |
| CA06597 | - | - | + | + | + | - | - | Flytrap | GFP Trap | |
| CA06598 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| CA06603 | - | - | - | + | - | - | - | Flytrap | GFP Trap | |
| CA06614 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| CA06658 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| CA06666 | - | - | - | - | - | - | - | Flytrap | GFP Trap | |
| CA06750 | + | - | - | + | - | + | - | Flytrap | GFP Trap | |
| Cad | + | - | - | - | - | - | - | Won-jae Lee | Gal4 | |
| DmATP7 | + | - | + | + | + | + | - | J. Camakaris | Gal4 | |
| FerHCH | + | - | - | - | - | - | - | F. Missirlis | GFP Trap | |
| Gradient R1 | ||||||||||
| Gradient R2 | ||||||||||
| Gradient R5 | ||||||||||
| H167 | - | - | - | - | - | - | - | Lemaitre | GFP Trap | |
| Myo1A | + | - | - | - | - | - | - | Bloomington | Gal4 | |
| NP3048 | + | - | - | - | - | - | - | Lemaitre | Gal4 | |
| NPC1b | + | - | - | - | - | - | - | L. Pallanck | Gal4 | |
| XB30 | - | - | - | - | - | - | - | Lemaitre | GFP Trap | |
| average pattern | ||||||||||
| btl | - | - | - | - | - | - | - | Lemaitre | Gal4 | |
| c273 | + | - | - | - | - | + | - | Xavier Morin | GFP Trap | |
| c536 | - | - | - | - | - | - | - | Lemaitre | GFP Trap | |
| cg | - | + | - | + | - | - | - | Lemaitre | Gal4 | |
| dFrz3RFP | R. Dasgupta | RFP reporter | ||||||||
| lysC | + | - | - | - | - | - | - | Lemaitre | Gal4 | |
| mex | + | - | - | - | - | - | - | M.D. Phillips and G.H. Thomas | Gal4 | |
