Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name aub
Flybase description The gene aubergine is referred to in FlyBase by the symbol Dmel\aub (CG6137, FBgn0000146).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -42.6321 -24.0125 -34.536412 -46.7477 -59.176869 -54.9733 -50.39055 -42.623041
    Affimetrix absolute value 3.017 3.083 3.111 2.85 2.875 2.782 2.902 2.871
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: piRNA binding; RNA binding.
There is experimental evidence for 12 unique biological process terms, many of which group under: biological regulation; cellular component organization or biogenesis; cellular process involved in reproduction; multicellular organismal reproductive process; anatomical structure development; regulation of metabolic process; regulation of cellular macromolecule biosynthetic process; cell cycle; regulation of multicellular organismal development; gene silencing by RNA.
28 alleles are reported.
The phenotypes of these alleles are annotated with: cystoblast; spermatid; karyosome; chorion; spermatocyte; female germline stem cell; dorsal appendage.
It has 2 annotated transcripts and 2 annotated polypeptides.
Protein features are: Argonaute/Dicer protein, PAZ; Ribonuclease H-like; Stem cell self-renewal protein Piwi.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 00-06 hour embryonic stages, in adult female stages.
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