Flygut: an atlas of the Drosophila adult midgut

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Gene name CkIIbeta
Flybase description The gene Casein kinase II β subunit is referred to in FlyBase by the symbol Dmel\CkIIβ (CG15224, FBgn0000259).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -25.6545 -16.2306 -27.23488 -22.8252 -37.966363 -19.6106 -34.8183 -31.091065
    Affimetrix absolute value 3.741 3.6 3.439 3.89 3.565 4.27 3.452 3.33
    Affymetric present call in "x" number of chips 3 1 3 3 2 3 2 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein serine/threonine kinase activity; protein kinase regulator activity.
There is experimental evidence that it is involved in the biological process: protein phosphorylation; locomotor rhythm; mushroom body development; circadian rhythm; neurogenesis.
35 alleles are reported.
The phenotypes of these alleles are annotated with: Kenyon cell; mushroom body; mushroom body calyx; peripheral nervous system; ventral nerve cord commissure; longitudinal connective; wing.
It has 9 annotated transcripts and 9 annotated polypeptides.
Protein features are: Casein kinase II, regulatory subunit; Casein kinase II, regulatory subunit, alpha-helical; Casein kinase II, regulatory subunit, beta-sheet.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression.
Peak expression observed within 00-18 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in adult female stages.
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