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| Gene name | Chc | ||||||||||||||||||||||||||||||||||||
| Flybase description | The gene Clathrin heavy chain is referred to in FlyBase by the symbol Dmel\Chc (CG9012, FBgn0000319). | ||||||||||||||||||||||||||||||||||||
| Expression data along the gut |
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| Intestinal gene expression in different physiological conditions |
Ecc15: flies orally infected with Erwinia carotovora carotovora 15. Pe: flies orally infected with Pseudomonas entomophila. Pe gacA: flies orally infecte with Pseudomonas entomophila gacA. For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe. |
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| Gene details (from Flybase) | It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: binding; structural molecule activity. There is experimental evidence that it is involved in the biological process: sperm individualization; positive regulation of Notch signaling pathway; dsRNA transport; endocytosis; positive regulation of endocytosis; liquid clearance, open tracheal system; regulation of tube length, open tracheal system; regulation of growth; extracellular matrix organization; compound eye retinal cell programmed cell death. 25 alleles are reported. The phenotypes of these alleles are annotated with 12 unique terms, many of which group under: cytoplasmic part; organ system; organelle; external compound sense organ; nervous system; organ system subdivision; intracellular membrane-bounded organelle; synapse; peripheral nervous system; non-connected developing system; imaginal precursor; spermatozoon; garland cell. It has 6 annotated transcripts and 6 annotated polypeptides. Protein features are: Armadillo-type fold; Clathrin, heavy chain; Clathrin, heavy chain, linker, core motif; Clathrin, heavy chain, linker/propeller domain; Clathrin, heavy chain, propeller repeat; Clathrin, heavy chain, propeller, N-terminal; Clathrin, heavy chain/VPS, 7-fold repeat; Tetratricopeptide-like helical. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of high expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. . |
