Flygut: an atlas of the Drosophila adult midgut

Mouche Logo lab lemaitre Bbcf logo

Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name DebB
Flybase description The gene Small ribonucleoprotein particle protein SmF is referred to in FlyBase by the symbol Dmel\SmF (CG16792, FBgn0000426).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -1.2946 -1.1464 -1.338032 -1.1749 -1.238398 0.3963 -2.29799 -1.271138
    Affimetrix absolute value 8.037 7.422 7.761 8.156 8.453 8.641 7.362 7.898
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence that it is involved in the biological process: mitotic spindle organization.
3 alleles are reported.
No phenotypic data is available.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Like-Sm ribonucleoprotein (LSM) domain; Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type; Like-Sm ribonucleoprotein (LSM)-related domain; Small nuclear ribonucleoprotein SmF.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression.
Peak expression observed within 00-12 hour embryonic stages.
.