Flygut: an atlas of the Drosophila adult midgut

 Mouche Logo lab lemaitre Bbcf logo
Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
Search expression data by gene:
Gene name ecd
Flybase description The gene ecdysoneless is referred to in FlyBase by the symbol Dmel\ecd (CG5714, FBgn0000543).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -3.7276 -3.4939 -4.923408 -6.8461 -6.478213 -6.4292 -7.10833 -5.422834
    Affimetrix absolute value 6.511 5.818 5.884 5.613 6.066 5.94 5.737 5.831
    Affymetric present call in "x" number of chips 3 3 3 3 3 3 3 3
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
Its molecular function is unknown.
There is experimental evidence for 14 unique biological process terms, many of which group under: anatomical structure development; multicellular organismal process; multicellular organismal reproductive process; embryonic development via the syncytial blastoderm; multicellular organism reproduction; multi-organism process; cellular process involved in reproduction; instar larval development; cellular component organization or biogenesis; organ development; biological regulation.
14 alleles are reported.
The phenotypes of these alleles are annotated with 20 unique terms, many of which group under: organ system; multicellular structure; female germline cyst; egg; extended germ band embryo; hemocyte; somatic cell; cell part; cuticle; anatomical structure.
It has one annotated transcript and one annotated polypeptide.
Protein features are: SGT1.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression.
Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult female stages.
.