Flygut: an atlas of the Drosophila adult midgut

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Home Overview of gut regions Anatomy Histology Transgene expression mapping Gene expression
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Gene name ft
Flybase description The gene fat is referred to in FlyBase by the symbol Dmel\ft (CG3352, FBgn0001075).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -37.4668 -35.3296 -59.401061 -66.3269 -93.967997 -68.9741 -68.42792 -56.839575
    Affimetrix absolute value 3.183 2.489 2.307 2.341 2.206 2.46 2.468 2.417
    Affymetric present call in "x" number of chips 3 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: cell adhesion molecule binding.
There is experimental evidence for 21 unique biological process terms, many of which group under: anatomical structure development; biological regulation; regulation of biological process; establishment of planar polarity; cellular component organization or biogenesis; sensory organ development; post-embryonic appendage morphogenesis; epithelial cell differentiation; cell proliferation; macromolecule modification; growth.
49 alleles are reported.
The phenotypes of these alleles are annotated with 28 unique terms, many of which group under: organ system subdivision; adult segment; organ system; thoracic segment; imaginal precursor; adult mesothoracic segment; larval thorax; sensillum; podocyte; wing hair; prothoracic leg disc; dorsal thoracic disc; protein complex; external compound sense organ.
It has one annotated transcript and one annotated polypeptide.
Protein features are: Cadherin; Cadherin conserved site; Cadherin-like; Concanavalin A-like lectin/glucanase; Concanavalin A-like lectin/glucanase, subgroup; EGF; EGF-like region, conserved site; Epidermal growth factor-like; Epidermal growth factor-like, type 3; Laminin G domain; Laminin G, subdomain 1; Laminin G, subdomain 2.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression.
Peak expression observed within 06-12 hour embryonic stages.
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