Flygut: an atlas of the Drosophila adult midgut

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Gene name mud
Flybase description The gene mushroom body defect is referred to in FlyBase by the symbol Dmel\mud (CG12047, FBgn0002873).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -53.1071 -41.6243 -45.877092 -67.8598 -72.861083 -69.9645 -73.31055 -54.067952
    Affimetrix absolute value 2.695 2.264 2.661 2.306 2.582 2.433 2.361 2.523
    Affymetric present call in "x" number of chips 0 0 0 0 0 0 0 0
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: protein binding; DNA binding.
There is experimental evidence that it is involved in the biological process: asymmetric neuroblast division; spindle assembly involved in female meiosis II; mushroom body development.
13 alleles are reported.
The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: somatic stem cell; organ system subdivision; larval abdominal segment; multi-cell-component structure; adult segment; abdominal segment 7; somatic cell; nervous system; larval abdominal segment 5; abdominal 2 neuroblast ventro-medial cluster; sensillum; abdominal 5 neuroblast ventro-medial cluster; FBbt:00003689; organelle.
It has 5 annotated transcripts and 5 annotated polypeptides.
Protein features are: Manganese/iron superoxide dismutase; Nuclear hormone receptor, ligand-binding; Prefoldin; RuvA domain 2-like.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression.
Peak expression observed within 00-06 hour embryonic stages.
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