Flygut: an atlas of the Drosophila adult midgut

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Gene name mus309
Flybase description The gene mutagen-sensitive 309 is referred to in FlyBase by the symbol Dmel\mus309 (CG6920, FBgn0002906).
Expression data along the gut
    Crop Cardia/R1 R2 R3 R4 R5 Hindgut Full gut
    Ratio gene/RPL42 -41.5555 -24.4376 -29.817547 -48.3137 -51.795883 -51.8558 -53.13333 -42.011158
    Affimetrix absolute value 3.046 3.018 3.281 2.802 3.073 2.866 2.84 2.89
    Affymetric present call in "x" number of chips 1 1 3 0 2 3 1 2
Intestinal gene expression in different physiological conditions
Ecc15: flies orally infected with Erwinia carotovora carotovora 15.
Pe: flies orally infected with Pseudomonas entomophila.
Pe gacA: flies orally infecte with Pseudomonas entomophila gacA.
For methods and description, see Buchon et al. 2009, Cell Host Microbe, and Chakrabarti et al. 2012, Cell Host Microbe.
Gene details (from Flybase) It is a protein_coding_gene from Drosophila melanogaster.
There is experimental evidence that it has the molecular function: DNA strand annealing activity; Y-form DNA binding; ATP-dependent 3'-5' DNA helicase activity; DNA-dependent ATPase activity.
There is experimental evidence that it is involved in the biological process: reciprocal meiotic recombination; DNA duplex unwinding; double-strand break repair via synthesis-dependent strand annealing; response to DNA damage stimulus; strand displacement; double-strand break repair; DNA synthesis involved in DNA repair; double-strand break repair via homologous recombination.
16 alleles are reported.
The phenotype of these alleles is annotated with: wing disc.
It has one annotated transcript and one annotated polypeptide.
Protein features are: DEAD-like helicase; DNA helicase, ATP-dependent, RecQ type; DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; HRDC-like; HRDC-like, subdomain 1; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; RQC domain.
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression.
Peak expression observed within 00-06 hour embryonic stages, in adult female stages.
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